3DS:CTRTransfer/Manual

A manual CTRTransfer is an advanced version of a CTRTransfer, used to restore more parts of the system software. It uses the same CTRTransfer images as the regular version, but overwrites the entire CTRNAND instead of just replacing the files that are most prone to damage.

This is an advanced process that should only be used when all other options are exhausted.
It can be destructive if done incorrectly, so use caution.
If you run into any issues or do not understand something, join the Nintendo Homebrew Discord server and ask, in English, for help.

Instructions

What You Need

A CTRTransfer image from here that matches your model and region. This requires a torrent client such as qBittorrent or Deluge.
The manual_transfer.gm9 script.
- (To download, right-click the link and select the option 'Save As', 'Save Target As', 'Save Link As', or similar.)

Section I - Manual CTRTransfer

Power off the console, remove the SD card, and connect it to your computer
If you do not already have GodMode9 on your SD card, take the time to get it now
Once the CTRTransfer image is downloaded, place the CTRTransfer's .bin and .bin.sha files in sd:/gm9/out
Copy the manual_transfer.gm9 file you downloaded into sd:/gm9/scripts
Put your SD card back into your console
Hold START, and while holding START, power on your console. This will launch GodMode9
Navigate into the drive [S:] SYSNAND VIRTUAL
Press A on essential.exefs and select Copy to 0:/gm9/out
Press A to continue
Press the HOME button, then go into Scripts... and select manual_transfer
Wait for the script to complete, and then press A when it asks to reboot
You should reach the HOME Menu without issues

The manual CTRTransfer has been completed.

If this did not fix your issue, you may have a hardware issue or serious software issue that will require further attention. Need some help? Ask us on Discord: Nintendo Homebrew